UMIN-CTR Clinical Trial

Unique ID issued by UMIN UMIN000056067
Receipt number R000064060
Scientific Title Significance of molecular epidemiological surveillance for non-tuberculous mycobacterial pulmonary disease: a single center prospective cohort study
Date of disclosure of the study information 2024/11/06
Last modified on 2024/11/06 09:46:29

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Basic information

Public title

Significance of molecular epidemiological surveillance for non-tuberculous mycobacterial pulmonary disease: a single center prospective cohort study

Acronym

Molecular Surveillance of NTM Lung Disease: Single-Center Cohort Study

Scientific Title

Significance of molecular epidemiological surveillance for non-tuberculous mycobacterial pulmonary disease: a single center prospective cohort study

Scientific Title:Acronym

Molecular Surveillance of NTM Lung Disease: Single-Center Cohort Study

Region

Japan


Condition

Condition

Nontuberclousis mycobacteria

Classification by specialty

Pneumology Infectious disease

Classification by malignancy

Others

Genomic information

YES


Objectives

Narrative objectives1

1. To comprehensively investigate strain replacements and their impact in nontuberculous mycobacteria (NTM) over a defined period.
2. To evaluate the effectiveness of NGS-based digital VNTR.

Basic objectives2

Efficacy

Basic objectives -Others


Trial characteristics_1


Trial characteristics_2


Developmental phase



Assessment

Primary outcomes

1. Frequency of species and strain changes over approximately 1.5 years
2. Concordance rate between digital VNTR and conventional VNTR

Key secondary outcomes



Base

Study type

Observational


Study design

Basic design


Randomization


Randomization unit


Blinding


Control


Stratification


Dynamic allocation


Institution consideration


Blocking


Concealment



Intervention

No. of arms


Purpose of intervention


Type of intervention


Interventions/Control_1


Interventions/Control_2


Interventions/Control_3


Interventions/Control_4


Interventions/Control_5


Interventions/Control_6


Interventions/Control_7


Interventions/Control_8


Interventions/Control_9


Interventions/Control_10



Eligibility

Age-lower limit

18 years-old <=

Age-upper limit


Not applicable

Gender

Male and Female

Key inclusion criteria

Patients diagnosed with or suspected of NTM-PD, based on international guidelines, who provided written informed consent.

Key exclusion criteria

None

Target sample size

100


Research contact person

Name of lead principal investigator

1st name Hiroshi
Middle name
Last name Kida

Organization

Osaka Toneyama Medical Center

Division name

Respiratory medicine

Zip code

560-8552

Address

5-1-1 Toneyama, Toyonaka, Osaka, Japan

TEL

06-6853-2001

Email

kida.hiroshi.sv@mail.hosp.go.jp


Public contact

Name of contact person

1st name Kazuki
Middle name
Last name Hashimoto

Organization

Osaka Toneyama Medical Center

Division name

Respiratory medicine

Zip code

560-8552

Address

5-1-1 Toneyama, Toyonaka, Osaka, Japan

TEL

06-6853-2001

Homepage URL


Email

k.hashimoto@imed3.med.osaka-u.ac.jp


Sponsor or person

Institute

Osaka Toneyama Medical Center

Institute

Department

Personal name



Funding Source

Organization

Osaka Toneyama Medical Center

Organization

Division

Category of Funding Organization

Other

Nationality of Funding Organization



Other related organizations

Co-sponsor


Name of secondary funder(s)



IRB Contact (For public release)

Organization

Osaka Toneyama Medical Center

Address

5-1-1 Toneyama, Toyonaka, Osaka, Japan

Tel

06-6853-2001

Email

k.hashimoto@imed3.med.osaka-u.ac.jp


Secondary IDs

Secondary IDs

NO

Study ID_1


Org. issuing International ID_1


Study ID_2


Org. issuing International ID_2


IND to MHLW



Institutions

Institutions



Other administrative information

Date of disclosure of the study information

2024 Year 11 Month 06 Day


Related information

URL releasing protocol

None

Publication of results

Unpublished


Result

URL related to results and publications

In preparation for publishing

Number of participants that the trial has enrolled

112

Results

Of the 112 cases analyzed, 13 (11.6%) showed changes in the species of bacteria, 15 (13.4%) showed changes in the VNTR type, but not in the species of bacteria, and 84 (75.0%) showed no changes in either the species of bacteria or the VNTR type. The results of dVNTR typing were consistent with those of conventional VNTR typing, and it was possible to easily perform typing at the strain level.

Results date posted

2024 Year 11 Month 06 Day

Results Delayed


Results Delay Reason


Date of the first journal publication of results


Baseline Characteristics

A total of 232 patients were participated in this prospective study, of which 166 had positive sputum cultures in the enrollment period (From 1 March 2021, to 31 March 2022). Follow-up positive cultures at least more than eight months apart were obtained in 112 patients (from enrollment to December 2023). The median interval was 1.5 years (IQR 1.1-1.9). Analysis was also performed on isolates from 4 cases in which culture specimens showed different colony growth and characteristics. The median age of the cohort was 72 years (IQR 67-80), with 81 women (71.9%), and the median BMI was 19.1 (IQR 16.4-22.5). Radiological findings revealed the nodular bronchiectatic form without cavitation in 59 patients (52.2%).

Participant flow

We have established the prospective cohort of NTM. We enrolled patients who had been diagnosed with or suspected of NTM-PD, in accordance with international guideline.

Adverse events

None

Outcome measures

We performed a time-course analysis of species, subspecies, strains and drug susceptibilities using core genome multi locus sequencing typing (cgMLST) based on whole genome sequencing and variable numbers of tandem repeats (VNTR) typing, and drug susceptibility testing at approximately 1.5-year intervals. In addition, we developed a simple long-read sequencing-based digital VNTR (dVNTR) typing and evaluated its efficacy.

Plan to share IPD


IPD sharing Plan description



Progress

Recruitment status

Completed

Date of protocol fixation

2021 Year 01 Month 01 Day

Date of IRB

2024 Year 11 Month 05 Day

Anticipated trial start date

2021 Year 05 Month 01 Day

Last follow-up date

2022 Year 03 Month 31 Day

Date of closure to data entry


Date trial data considered complete


Date analysis concluded



Other

Other related information

Observation only


Management information

Registered date

2024 Year 11 Month 06 Day

Last modified on

2024 Year 11 Month 06 Day



Link to view the page

Value
https://center6.umin.ac.jp/cgi-open-bin/ctr_e/ctr_view.cgi?recptno=R000064060