Unique ID issued by UMIN | UMIN000038467 |
---|---|
Receipt number | R000043827 |
Scientific Title | Proteomic analysis for establishing a biomarker panel for the onset of Adult T-cell Leukemia (ATL) |
Date of disclosure of the study information | 2020/03/30 |
Last modified on | 2019/11/01 17:42:51 |
Proteomic analysis for establishing a biomarker panel for the onset of Adult T-cell Leukemia (ATL)
Proteomic analysis for establishing a biomarker panel for ATL
Proteomic analysis for establishing a biomarker panel for the onset of Adult T-cell Leukemia (ATL)
Proteomic analysis for establishing a biomarker panel for ATL
Japan |
Adult T-cell Leukemia (ATL)
Hematology and clinical oncology | Infectious disease |
Others
NO
Search for blood-based protein biomarkers for ATL onset, prognosis, and chemosensitivity, by comparing proteomic profiles in HTLV-1 carrier state versus ATL, ATL subtypes (acute, lymphoma, chronic, smoldering), and ATL versus remission state
Others
Establishment of biomarker panel for ATL
Exploratory
Others
Not applicable
Calculation of p-values by t-test and discrimination capacities using AUC index, and setting of discrimination boundaries in multi-protein comparisons using machine learning algorithms, and ranking proteins based on AUC and significant values to detect candidate biomarker panel for ATL
Development a proteomic profile for ATL patients categorized according to ATL subtype (acute, chronic, smoldering, lymphoma) to search for ATL prognostic biomarkers; Development of a proteomic profile for ATL versus ATL in remission to search for ATL chemosensitivity biomarkers
Observational
20 | years-old | <= |
Not applicable |
Male and Female
Cryopreserved plasma samples in the Okinawa HTLV-1/ATL Biobank (with consent for biological sample storage and use for future research) are used for this study. These samples were obtained from patients recruited from the following research projects: Establishment of the Okinawa HTLV-1/ATL Biobank, with University of the Ryukyus clinical ethics review no. 777, and Clinical Application of the Minute Residual Disease (MRD) in high-grade ATL patients, with University of the Ryukyus clinical ethics review no. 478
Participants withdrawing consent through opt-out forms available online at the homepage of the Laboratory of Hematoimmunology are excluded
85
1st name | Takuya |
Middle name | |
Last name | Fukushima |
University of the Ryukyus
School of Health Sciences, Faculty of Medicine, Laboratory of Hematoimmunology
903-0215
207 Uehara, Nishihara, Okinawa, Japan
+81-98-895-1276
fukutaku@med.u-ryukyu.ac.jp
1st name | Takuya |
Middle name | |
Last name | Fukushima |
University of the Ryukyus
School of Health Sciences, Faculty of Medicine, Laboratory of Hematoimmunology
903-0215
207 Uehara, Nishihara, Okinawa, Japan
+81-98-895-3331
fukutaku@med.u-ryukyu.ac.jp
University of the Ryukyus
University of the Ryukyus
Japanese Governmental office
NEC Corporation
University of the Ryukyus Clinical Research Ethics Review Board
207 Uehara, Nishihara, Okinawa, Japan 903-0215
+81-98-895-8016
knknkyu@to.jim.u-ryukyu.ac.jp
NO
2020 | Year | 03 | Month | 30 | Day |
Unpublished
85
No longer recruiting
2019 | Year | 07 | Month | 11 | Day |
2019 | Year | 07 | Month | 11 | Day |
2019 | Year | 08 | Month | 11 | Day |
2019 | Year | 10 | Month | 09 | Day |
t-test, AUC index, and stepwise selection methods and evaluation of distinction performance by simple models (linear discriminant analyses, logistic regression, etc.) and machine learning methods (decision tree, neural network, support vector machine, etc. We conduct survival analysis by Kaplan-Meier method and conduct two comparison between groups by log-rank test.
2019 | Year | 11 | Month | 01 | Day |
2019 | Year | 11 | Month | 01 | Day |
Value
https://center6.umin.ac.jp/cgi-open-bin/ctr_e/ctr_view.cgi?recptno=R000043827